Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(18)-2'-o)-methyltransferase trmh | FCU55_07515 | Not Available | Positive | 1578562 - 1579251 | 25360.6 |
| atp-dependent dna helicase recg | FCU55_07520 | Not Available | Positive | 1579257 - 1581338 | 76529.2 |
| sodium/glutamate symporter | FCU55_07525 | Not Available | Negative | 1581372 - 1582577 | 42445.9 |
| xanthine/proton symporter xanp | FCU55_07530 | Not Available | Positive | 1582857 - 1584248 | 48871.2 |
| asma family protein | FCU55_07535 | Not Available | Positive | 1584369 - 1586078 | 62237.9 |
| d-lyxose/d-mannose family sugar isomerase | FCU55_07540 | Not Available | Negative | 1586122 - 1586802 | 26151.1 |
| rok family protein | FCU55_07545 | Not Available | Negative | 1586783 - 1587715 | 32958.6 |
| ketose-bisphosphate aldolase | FCU55_07550 | Not Available | Negative | 1587763 - 1588623 | 30815.0 |
| class ii fructose-bisphosphate aldolase family protein | FCU55_07555 | Not Available | Negative | 1588704 - 1589555 | 30031.4 |
| pts fructose transporter subunit iic | FCU55_07560 | Not Available | Negative | 1589567 - 1590658 | 38801.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





