Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-diketo-l-gulonate transporter large permease yian | FCU55_07165 | Not Available | Positive | 1501774 - 1503249 | 52995.3 |
| 2,3-diketo-l-gulonate transporter substrate-binding protein yiao | FCU55_07170 | Not Available | Positive | 1503262 - 1504248 | 36041.2 |
| l-xylulokinase | FCU55_07175 | Not Available | Positive | 1504252 - 1505748 | 55184.0 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | FCU55_07180 | Not Available | Positive | 1505745 - 1506407 | 23521.1 |
| l-ribulose-5-phosphate 3-epimerase | FCU55_07185 | Not Available | Positive | 1506400 - 1507260 | 32478.9 |
| l-ribulose-5-phosphate 4-epimerase | FCU55_07190 | Not Available | Positive | 1507254 - 1507949 | 25570.5 |
| helix-turn-helix domain-containing protein | FCU55_07195 | Not Available | Negative | 1507981 - 1508796 | 31521.1 |
| mfs transporter | FCU55_07200 | Not Available | Positive | 1509022 - 1510422 | 51528.1 |
| glycoside hydrolase family 127 protein | FCU55_07205 | Not Available | Positive | 1510433 - 1512406 | 75329.3 |
| aldehyde dehydrogenase | FCU55_07210 | Not Available | Negative | 1512583 - 1514121 | 56365.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





