Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative cro anti-repressor | FCU55_18840 | Not Available | Positive | 3865776 - 3866003 | 8246.92 |
| hypothetical protein | FCU55_18845 | Not Available | Positive | 3865987 - 3866538 | 21253.5 |
| Hypothetical protein | FCU55_18850 | Not Available | Positive | 3866510 - 3867550 | 38397.1 |
| Replication protein 14 | FCU55_18855 | Not Available | Positive | 3867582 - 3868004 | 16340.5 |
| Hypothetical protein | FCU55_18860 | Not Available | Positive | 3868038 - 3868808 | 28113.5 |
| Lygf | FCU55_18865 | Not Available | Positive | 3868824 - 3869216 | 15040.2 |
| Gp58 | FCU55_18870 | Not Available | Positive | 3869213 - 3869509 | 11050.4 |
| Hypothetical protein | FCU55_18875 | Not Available | Positive | 3869506 - 3869967 | 17645.7 |
| Hypothetical protein | FCU55_18880 | Not Available | Positive | 3869945 - 3870301 | 14170.9 |
| Hypothetical protein | FCU55_18885 | Not Available | Positive | 3870395 - 3870577 | 7065.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





