Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylr family transcriptional regulator | FCU55_07115 | Not Available | Positive | 1491417 - 1492595 | 44871.7 |
| protein bax | FCU55_07120 | Not Available | Negative | 1492703 - 1493527 | 30869.3 |
| alpha-amylase | FCU55_07125 | Not Available | Positive | 1493847 - 1495877 | 75739.4 |
| valine--pyruvate transaminase | FCU55_07130 | Not Available | Positive | 1496055 - 1497308 | 46715.9 |
| 4fe-4s dicluster domain-containing protein | FCU55_07135 | Not Available | Negative | 1497347 - 1497820 | 17363.1 |
| iclr family transcriptional regulator yiaj | FCU55_07140 | Not Available | Negative | 1497922 - 1498770 | 31083.5 |
| 3-dehydro-l-gulonate 2-dehydrogenase | FCU55_07145 | Not Available | Positive | 1498971 - 1499969 | 36522.8 |
| duf386 domain-containing protein | FCU55_07150 | Not Available | Positive | 1499981 - 1500445 | 17376.8 |
| duf4862 family protein | FCU55_07155 | Not Available | Positive | 1500468 - 1501388 | 34359.8 |
| 2,3-diketo-l-gulonate trap transporter small permease yiam | FCU55_07160 | Not Available | Positive | 1501502 - 1501969 | 17270.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





