Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | FCU55_06865 | Not Available | Negative | 1438570 - 1439583 | 36338.1 |
| 4-phosphoerythronate dehydrogenase pdxb | FCU55_06870 | Not Available | Negative | 1439649 - 1440785 | 41273.9 |
| flagella biosynthesis regulator flk | FCU55_06875 | Not Available | Positive | 1440884 - 1441879 | 36640.4 |
| arabinose transporter | FCU55_06880 | Not Available | Negative | 1441876 - 1443054 | 40453.7 |
| beta-ketoacyl-acp synthase i | FCU55_06885 | Not Available | Negative | 1443319 - 1444539 | 42615.9 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | FCU55_06890 | Not Available | Positive | 1444698 - 1446704 | 74383.2 |
| yfcl family protein | FCU55_06895 | Not Available | Negative | 1446825 - 1447103 | 10023.6 |
| elongation factor p hydroxylase | FCU55_06900 | Not Available | Negative | 1447137 - 1447685 | 21130.6 |
| hypothetical protein | FCU55_06905 | Not Available | Negative | 1447685 - 1448494 | 28631.2 |
| penicillin-insensitive murein endopeptidase | FCU55_06910 | Not Available | Negative | 1448494 - 1449318 | 30241.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





