Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine abc transporter substrate-binding protein hisj | FCU55_06815 | Not Available | Negative | 1428758 - 1429540 | 28484.9 |
| lysine/arginine/ornithine abc transporter substrate-binding protein argt | FCU55_06820 | Not Available | Negative | 1429761 - 1430543 | 27973.1 |
| ubix family flavin prenyltransferase | FCU55_06825 | Not Available | Negative | 1430809 - 1431378 | 20682.2 |
| amidophosphoribosyltransferase | FCU55_06830 | Not Available | Negative | 1431473 - 1432990 | 56533.4 |
| colicin v production protein | FCU55_06835 | Not Available | Negative | 1433027 - 1433515 | 17991.0 |
| cell division protein dedd | FCU55_06840 | Not Available | Negative | 1433956 - 1434618 | 22971.8 |
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | FCU55_06845 | Not Available | Negative | 1434608 - 1435876 | 45439.2 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | FCU55_06850 | Not Available | Negative | 1435946 - 1436860 | 33323.9 |
| deda family protein | FCU55_06855 | Not Available | Negative | 1437016 - 1437675 | 24647.8 |
| trna pseudouridine(38-40) synthase trua | FCU55_06860 | Not Available | Negative | 1437758 - 1438570 | 30414.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





