Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-3-deoxy-l-rhamnonate aldolase | FCU55_06515 | Not Available | Negative | 1365649 - 1366452 | 28903.6 |
| mfs transporter | FCU55_06520 | Not Available | Negative | 1366470 - 1367759 | 46095.2 |
| l-rhamnonate dehydratase | FCU55_06525 | Not Available | Negative | 1367816 - 1369021 | 44206.9 |
| iclr family transcriptional regulator | FCU55_06530 | Not Available | Negative | 1369036 - 1369818 | 28988.0 |
| nicotinamide mononucleotide deamidase-related protein yfay | FCU55_06535 | Not Available | Negative | 1370038 - 1371240 | 44134.1 |
| hypothetical protein | FCU55_06540 | Not Available | Negative | 1371340 - 1371882 | 18518.6 |
| nucleoside triphosphatase nudi | FCU55_06545 | Not Available | Positive | 1372161 - 1372586 | 16357.6 |
| histidine phosphatase family protein | FCU55_06550 | Not Available | Negative | 1372625 - 1373227 | 22394.9 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | FCU55_06555 | Not Available | Positive | 1373535 - 1374674 | 41623.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | FCU55_06560 | Not Available | Positive | 1374678 - 1375646 | 36222.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





