Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p-like protein yeip | FCU55_06160 | Not Available | Positive | 1276886 - 1277458 | 21533.9 |
| mannitol dehydrogenase family protein | FCU55_06165 | Not Available | Positive | 1277681 - 1279147 | 54041.8 |
| gtp-binding protein | FCU55_06170 | Not Available | Positive | 1279265 - 1280251 | 36062.2 |
| kdo(2)-lipid a phosphotransferase | FCU55_06175 | Not Available | Positive | 1280290 - 1281003 | 26773.8 |
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | FCU55_06180 | Not Available | Positive | 1281415 - 1281981 | 21041.1 |
| cyclic di-gmp phosphodiesterase | FCU55_06185 | Not Available | Positive | 1282162 - 1283718 | 58589.6 |
| abc transporter substrate-binding protein | FCU55_06190 | Not Available | Positive | 1283800 - 1285614 | 69783.7 |
| abc transporter permease | FCU55_06195 | Not Available | Positive | 1285615 - 1286709 | 40362.6 |
| abc transporter permease | FCU55_06200 | Not Available | Positive | 1286709 - 1287734 | 38108.7 |
| microcin c abc transporter atp-binding protein yejf | FCU55_06205 | Not Available | Positive | 1287736 - 1289325 | 58656.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





