Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU55_06010 | Not Available | Positive | 1243221 - 1243619 | 14579.6 |
| cidb/lrgb family autolysis modulator | FCU55_06015 | Not Available | Positive | 1243616 - 1244311 | 24471.1 |
| cytidine deaminase | FCU55_06020 | Not Available | Positive | 1244441 - 1245325 | 31568.6 |
| outer membrane permeability protein sana | FCU55_06025 | Not Available | Positive | 1245475 - 1246194 | 27288.5 |
| duf2542 family protein | FCU55_06030 | Not Available | Positive | 1246197 - 1246436 | 9264.61 |
| nad(p)-dependent oxidoreductase | FCU55_06035 | Not Available | Positive | 1246630 - 1247868 | 44212.9 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | FCU55_06040 | Not Available | Positive | 1247862 - 1249097 | 45077.4 |
| galactose/methyl galactoside abc transporter permease mglc | FCU55_06045 | Not Available | Negative | 1249340 - 1250350 | 35594.5 |
| galactose/methyl galactoside abc transporter atp-binding protein mgla | FCU55_06050 | Not Available | Negative | 1250366 - 1251886 | 56391.8 |
| galactose/glucose abc transporter substrate-binding protein mglb | FCU55_06055 | Not Available | Negative | 1251947 - 1252945 | 35714.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





