Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine abc transporter substrate-binding protein osmf | FCU55_05960 | Not Available | Negative | 1231162 - 1232079 | 32586.0 |
| beta-glucosidase bglx | FCU55_05965 | Not Available | Negative | 1232269 - 1234566 | 83548.8 |
| d-lactate dehydrogenase | FCU55_05970 | Not Available | Positive | 1234762 - 1236477 | 64696.0 |
| d-alanyl-d-alanine endopeptidase | FCU55_05975 | Not Available | Negative | 1236516 - 1237448 | 33889.4 |
| yip1 family protein | FCU55_05980 | Not Available | Negative | 1237622 - 1238209 | 21692.0 |
| deda family protein | FCU55_05985 | Not Available | Positive | 1238379 - 1238957 | 21422.9 |
| sdr family oxidoreductase | FCU55_05990 | Not Available | Negative | 1239087 - 1239848 | 26864.4 |
| multidrug resistance outer membrane protein mdtq | FCU55_05995 | Not Available | Negative | 1239901 - 1241337 | 52162.9 |
| protein yohp | FCU55_06000 | Not Available | Positive | 1241561 - 1241644 | 3092.28 |
| trna dihydrouridine(16) synthase dusc | FCU55_06005 | Not Available | Negative | 1242032 - 1242982 | 35357.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





