Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional isocitrate dehydrogenase kinase/phosphatase | FCU55_05850 | Not Available | Negative | 1202481 - 1204205 | 67107.7 |
| isocitrate lyase | FCU55_05855 | Not Available | Negative | 1204330 - 1205634 | 47524.1 |
| malate synthase a | FCU55_05860 | Not Available | Negative | 1205664 - 1207265 | 60364.1 |
| homoserine o-succinyltransferase | FCU55_05865 | Not Available | Negative | 1207534 - 1208463 | 35786.3 |
| acetyltransferase | FCU55_05870 | Not Available | Positive | 1208620 - 1209063 | 16472.8 |
| hypothetical protein | FCU55_05875 | Not Available | Negative | 1209127 - 1209510 | 14509.8 |
| duf4132 domain-containing protein | FCU55_05885 | Not Available | Positive | 1212479 - 1216111 | 137700.0 |
| moxr family atpase | FCU55_05895 | Not Available | Positive | 1217190 - 1218278 | 39750.9 |
| hypothetical protein | FCU55_05900 | Not Available | Positive | 1218289 - 1220568 | 83464.9 |
| vwa domain-containing protein | FCU55_05905 | Not Available | Positive | 1220561 - 1221697 | 42322.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





