Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| divalent metal cation transporter | FCU55_05630 | Not Available | Positive | 1155952 - 1157232 | 45616.5 |
| fad-binding protein | FCU55_05635 | Not Available | Positive | 1157243 - 1159279 | 75049.0 |
| quinone oxidoreductase | FCU55_05640 | Not Available | Positive | 1159385 - 1160368 | 35233.3 |
| envelope stress response protein pspg | FCU55_05645 | Not Available | Negative | 1160533 - 1160775 | 9066.98 |
| trna dihydrouridine(20/20a) synthase dusa | FCU55_05650 | Not Available | Negative | 1160909 - 1161904 | 36905.3 |
| zinc uptake transcriptional repressor zur | FCU55_05655 | Not Available | Positive | 1162060 - 1162575 | 19308.3 |
| csbd family protein | FCU55_05660 | Not Available | Negative | 1162617 - 1162826 | 8349.69 |
| mate family efflux transporter dinf | FCU55_05665 | Not Available | Negative | 1162942 - 1164267 | 47735.0 |
| repressor lexa | FCU55_05670 | Not Available | Negative | 1164340 - 1164948 | 22359.1 |
| diacylglycerol kinase | FCU55_05675 | Not Available | Negative | 1165058 - 1165426 | 13257.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





