Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cida/lrga family protein | FCU55_05480 | Not Available | Negative | 1119315 - 1119725 | 15472.9 |
| lysr family transcriptional regulator | FCU55_05485 | Not Available | Positive | 1119829 - 1120713 | 33106.7 |
| na+/h+ antiporter | FCU55_05490 | Not Available | Negative | 1120749 - 1122398 | 60526.6 |
| ncs2 family permease | FCU55_05495 | Not Available | Negative | 1122549 - 1123898 | 45762.5 |
| redox-sensitive transcriptional activator soxr | FCU55_05500 | Not Available | Negative | 1124445 - 1124909 | 17249.9 |
| superoxide response transcriptional regulator soxs | FCU55_05505 | Not Available | Positive | 1124995 - 1125318 | 12911.6 |
| c-di-gmp phosphodiesterase pdec | FCU55_05510 | Not Available | Negative | 1125321 - 1126907 | 60729.5 |
| hypothetical protein | FCU55_05515 | Not Available | Positive | 1127336 - 1127617 | 10288.0 |
| single-stranded dna-binding protein ssb1 | FCU55_05520 | Not Available | Negative | 1127716 - 1128252 | 18976.1 |
| excinuclease abc subunit uvra | FCU55_05525 | Not Available | Positive | 1128507 - 1131329 | 103876.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





