Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme lyase ccmf/nrfe family subunit | FCU55_05430 | Not Available | Negative | 1108668 - 1110386 | 63665.3 |
| cytochrome c nitrite reductase subunit nrfd | FCU55_05435 | Not Available | Negative | 1110406 - 1111362 | 35053.4 |
| cytochrome c nitrite reductase fe-s protein | FCU55_05440 | Not Available | Negative | 1111359 - 1112030 | 24590.8 |
| cytochrome c nitrite reductase pentaheme subunit | FCU55_05445 | Not Available | Negative | 1112027 - 1112593 | 20657.6 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | FCU55_05450 | Not Available | Negative | 1112638 - 1114074 | 53678.6 |
| hypothetical protein | FCU55_05455 | Not Available | Negative | 1113995 - 1114192 | 7730.29 |
| acetate--coa ligase | FCU55_05460 | Not Available | Positive | 1114466 - 1116424 | 72015.3 |
| duf485 domain-containing protein | FCU55_05465 | Not Available | Positive | 1116634 - 1116948 | 11658.3 |
| cation/acetate symporter actp | FCU55_05470 | Not Available | Positive | 1116945 - 1118594 | 59195.7 |
| lrgb family protein | FCU55_05475 | Not Available | Negative | 1118633 - 1119322 | 24932.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





