Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-allose transporter substrate-binding protein | FCU55_05330 | Not Available | Positive | 1084599 - 1085534 | 32927.7 |
| d-allose abc transporter atp-binding protein alsa | FCU55_05335 | Not Available | Positive | 1085662 - 1087194 | 56832.4 |
| d-allose abc transporter permease | FCU55_05340 | Not Available | Positive | 1087173 - 1088153 | 34303.8 |
| ribulose-phosphate 3-epimerase | FCU55_05345 | Not Available | Positive | 1088164 - 1088859 | 26081.7 |
| allose kinase | FCU55_05350 | Not Available | Positive | 1088843 - 1089772 | 33809.8 |
| alkyl sulfatase yjcs | FCU55_05355 | Not Available | Positive | 1090045 - 1092030 | 73237.0 |
| hypothetical protein | FCU55_05360 | Not Available | Positive | 1092239 - 1092514 | 10265.2 |
| multidrug efflux transporter periplasmic adaptor subunit mdtn | FCU55_05365 | Not Available | Positive | 1092533 - 1093564 | 36924.3 |
| multidrug efflux transporter permease subunit mdto | FCU55_05370 | Not Available | Positive | 1093564 - 1095615 | 76235.3 |
| multidrug efflux transporter outer membrane subunit mdtp | FCU55_05375 | Not Available | Positive | 1095612 - 1097078 | 53482.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





