Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator melr | FCU55_05180 | Not Available | Positive | 1055599 - 1056507 | 34895.9 |
| arginine decarboxylase | FCU55_05185 | Not Available | Positive | 1056706 - 1058973 | 84470.9 |
| arac family transcriptional regulator | FCU55_05190 | Not Available | Positive | 1059309 - 1060070 | 29022.4 |
| arginine/agmatine antiporter | FCU55_05195 | Not Available | Positive | 1060207 - 1061544 | 46845.3 |
| phosphoethanolamine transferase epta | FCU55_05200 | Not Available | Positive | 1061648 - 1063291 | 61674.6 |
| two-component system response regulator basr | FCU55_05205 | Not Available | Positive | 1063288 - 1063956 | 24988.3 |
| two-component system sensor histidine kinase pmrb | FCU55_05210 | Not Available | Positive | 1063966 - 1065057 | 40992.8 |
| lpxt activity modulator pmrr | FCU55_05215 | Not Available | Negative | 1065033 - 1065122 | 3465.23 |
| glycine betaine/l-proline transporter prop | FCU55_05220 | Not Available | Negative | 1065234 - 1066736 | 54881.1 |
| hypothetical protein | FCU55_05225 | Not Available | Negative | 1067000 - 1067878 | 32917.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





