Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin | FCU55_05020 | Not Available | Positive | 1014635 - 1015012 | 13959.7 |
| hypothetical protein | FCU55_05025 | Not Available | Positive | 1015009 - 1015497 | 18036.5 |
| duf957 domain-containing protein | FCU55_05030 | Not Available | Positive | 1015509 - 1015706 | 7407.73 |
| duf4942 domain-containing protein | FCU55_05035 | Not Available | Positive | 1015791 - 1016501 | 27208.6 |
| hypothetical protein | FCU55_05040 | Not Available | Negative | 1016550 - 1017305 | 28571.4 |
| is21-like element isec10 family transposase | FCU55_05045 | Not Available | Negative | 1017302 - 1018801 | 57433.5 |
| cadc family transcriptional regulator | FCU55_05060 | Not Available | Positive | 1021462 - 1023000 | 57876.2 |
| hypothetical protein | FCU55_05065 | Not Available | Negative | 1022891 - 1023136 | 9376.35 |
| cadaverine/lysine antiporter | FCU55_05070 | Not Available | Positive | 1023366 - 1024700 | 46667.8 |
| lysine decarboxylase cada | FCU55_05075 | Not Available | Positive | 1024780 - 1026927 | 81250.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





