Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix family transcriptional regulator | FCU55_04905 | Not Available | Negative | 996215 - 997033 | 30921.6 |
| tetr/acrr family transcriptional regulator | FCU55_04910 | Not Available | Negative | 997056 - 997634 | 21354.0 |
| is3 family transposase | FCU55_04915 | Not Available | Negative | 997925 - 999138 | 46485.4 |
| pyridoxal phosphate-dependent aminotransferase | FCU55_04920 | Not Available | Positive | 999612 - 1000790 | 44635.8 |
| na+/h+ antiporter nhac | FCU55_04925 | Not Available | Positive | 1000783 - 1002234 | 51330.4 |
| duf3644 domain-containing protein | FCU55_04945 | Not Available | Negative | 1003548 - 1004426 | 33736.1 |
| ptd012 family protein | FCU55_04950 | Not Available | Negative | 1004644 - 1004757 | 4475.63 |
| inovirus gp2 family protein | FCU55_04955 | Not Available | Negative | 1004754 - 1005485 | 27598.0 |
| hypothetical protein | FCU55_04960 | Not Available | Negative | 1005844 - 1006080 | 9123.61 |
| hypothetical protein | FCU55_04965 | Not Available | Positive | 1007194 - 1007982 | 30963.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





