Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline tma-lyase-activating enzyme | FCU55_04855 | Not Available | Negative | 986798 - 987745 | 35749.0 |
| choline trimethylamine-lyase | FCU55_04860 | Not Available | Negative | 987797 - 991183 | 125793.0 |
| iron-containing alcohol dehydrogenase | FCU55_04865 | Not Available | Negative | 991210 - 992364 | 41282.6 |
| ethanolamine utilization protein eutn | FCU55_04870 | Not Available | Negative | 992380 - 992637 | 9448.45 |
| acetaldehyde dehydrogenase (acetylating) | FCU55_04875 | Not Available | Negative | 992664 - 994250 | 56748.2 |
| bmc domain-containing protein | FCU55_04880 | Not Available | Negative | 994304 - 994582 | 9502.51 |
| bmc domain-containing protein | FCU55_04885 | Not Available | Negative | 994597 - 994881 | 9654.7 |
| bmc domain-containing protein | FCU55_04890 | Not Available | Negative | 994899 - 995177 | 9398.53 |
| hypothetical protein | FCU55_04895 | Not Available | Positive | 995358 - 995618 | 9378.51 |
| hypothetical protein | FCU55_04900 | Not Available | Negative | 995697 - 996215 | 19418.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





