Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU55_04800 | Not Available | Negative | 977257 - 977817 | 21654.8 |
| inovirus gp2 family protein | FCU55_04805 | Not Available | Negative | 978064 - 978630 | 22509.8 |
| d-serine ammonia-lyase | FCU55_04810 | Not Available | Negative | 979741 - 981069 | 47883.3 |
| d-serine transporter dsdx | FCU55_04815 | Not Available | Negative | 981087 - 982424 | 47188.1 |
| dna-binding transcriptional regulator dsdc | FCU55_04820 | Not Available | Positive | 982642 - 983586 | 35849.8 |
| multidrug efflux smr transporter | FCU55_04830 | Not Available | Negative | 984249 - 984578 | 12005.2 |
| multidrug efflux smr transporter | FCU55_04835 | Not Available | Negative | 984594 - 984995 | 14494.1 |
| hypothetical protein | FCU55_04840 | Not Available | Negative | 985028 - 985693 | 24371.4 |
| phosphate propanoyltransferase | FCU55_04845 | Not Available | Negative | 985705 - 986325 | 22511.1 |
| bmc domain-containing protein | FCU55_04850 | Not Available | Negative | 986322 - 986786 | 16072.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





