Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator beti | FCU55_04260 | Not Available | Positive | 869657 - 870244 | 21776.4 |
| betaine-aldehyde dehydrogenase | FCU55_04265 | Not Available | Positive | 870258 - 871730 | 52898.2 |
| choline dehydrogenase | FCU55_04270 | Not Available | Positive | 871744 - 873414 | 61883.3 |
| dna recombinase | FCU55_04280 | Not Available | Positive | 874500 - 875063 | 21803.6 |
| helix-turn-helix transcriptional regulator | FCU55_04285 | Not Available | Positive | 875393 - 876187 | 29587.3 |
| hypothetical protein | FCU55_04290 | Not Available | Positive | 876341 - 877102 | 28239.4 |
| autotransporter outer membrane beta-barrel domain-containing protein | FCU55_04300 | Not Available | Positive | 878242 - 879435 | 41773.2 |
| hypothetical protein | FCU55_04305 | Not Available | Positive | 879619 - 880287 | 25483.1 |
| lactate utilization protein c | FCU55_04310 | Not Available | Negative | 880530 - 881225 | 25110.1 |
| iron-sulfur cluster-binding protein | FCU55_04315 | Not Available | Negative | 881218 - 882645 | 52985.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





