Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase | FCU55_04110 | Not Available | Negative | 831138 - 831947 | 28849.5 |
| 2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase | FCU55_04115 | Not Available | Negative | 831957 - 832823 | 31939.3 |
| 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase | FCU55_04120 | Not Available | Negative | 832841 - 833785 | 34198.0 |
| 3-(3-hydroxy-phenyl)propionate/3- hydroxycinnamic acid hydroxylase | FCU55_04125 | Not Available | Negative | 833787 - 835451 | 62216.3 |
| dna-binding transcriptional activator mhpr | FCU55_04130 | Not Available | Positive | 835642 - 836475 | 31295.0 |
| laci family dna-binding transcriptional regulator | FCU55_04135 | Not Available | Positive | 836552 - 837634 | 38634.6 |
| beta-galactosidase | FCU55_04140 | Not Available | Positive | 837757 - 840831 | 116486.0 |
| lactose permease | FCU55_04145 | Not Available | Positive | 840883 - 842136 | 46514.9 |
| galactoside o-acetyltransferase | FCU55_04150 | Not Available | Positive | 842202 - 842813 | 22787.3 |
| cytosine deaminase | FCU55_04155 | Not Available | Negative | 842934 - 844217 | 47640.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





