Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taurine abc transporter permease tauc | FCU55_04060 | Not Available | Negative | 821811 - 822638 | 29547.5 |
| taurine abc transporter atp-binding subunit | FCU55_04065 | Not Available | Negative | 822635 - 823402 | 28180.4 |
| taurine abc transporter substrate-binding protein | FCU55_04070 | Not Available | Negative | 823415 - 824377 | 34303.9 |
| formaldehyde-responsive transcriptional repressor frmr | FCU55_04075 | Not Available | Positive | 824683 - 824958 | 10318.3 |
| s-(hydroxymethyl)glutathione dehydrogenase | FCU55_04080 | Not Available | Positive | 824993 - 826102 | 39349.2 |
| s-formylglutathione hydrolase | FCU55_04085 | Not Available | Positive | 826195 - 827028 | 31421.1 |
| duf2058 domain-containing protein | FCU55_04090 | Not Available | Negative | 827153 - 827692 | 19953.9 |
| 3-(3-hydroxy-phenyl)propionate transporter mhpt | FCU55_04095 | Not Available | Negative | 827794 - 829005 | 41615.5 |
| 4-hydroxy-2-oxovalerate aldolase | FCU55_04100 | Not Available | Negative | 829181 - 830194 | 36398.6 |
| acetaldehyde dehydrogenase (acetylating) | FCU55_04105 | Not Available | Negative | 830191 - 831141 | 33457.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





