Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome o ubiquinol oxidase subunit ii | FCU55_03755 | Not Available | Positive | 759489 - 760436 | 34899.1 |
| cytochrome o ubiquinol oxidase subunit i | FCU55_03760 | Not Available | Positive | 760458 - 762449 | 74354.1 |
| cytochrome o ubiquinol oxidase subunit iii | FCU55_03765 | Not Available | Positive | 762439 - 763053 | 22624.0 |
| cytochrome o ubiquinol oxidase subunit iv | FCU55_03770 | Not Available | Positive | 763053 - 763382 | 11963.2 |
| protoheme ix farnesyltransferase | FCU55_03775 | Not Available | Positive | 763394 - 764284 | 32232.3 |
| mfs transporter | FCU55_03780 | Not Available | Positive | 764433 - 765797 | 48816.0 |
| yajq family cyclic di-gmp-binding protein | FCU55_03785 | Not Available | Negative | 765925 - 766416 | 18344.9 |
| 2-dehydropantoate 2-reductase | FCU55_03790 | Not Available | Positive | 766584 - 767495 | 33858.7 |
| protein deglycase yajl | FCU55_03795 | Not Available | Positive | 767458 - 768048 | 20793.2 |
| trna 4-thiouridine(8) synthase thii | FCU55_03800 | Not Available | Negative | 768102 - 769550 | 54976.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





