Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU55_03705 | Not Available | Negative | 746791 - 747162 | 12734.4 |
| peptidylprolyl isomerase | FCU55_03710 | Not Available | Negative | 747313 - 749184 | 68123.7 |
| dna-binding protein hu-beta | FCU55_03715 | Not Available | Negative | 749376 - 749648 | 9226.08 |
| lon protease | FCU55_03720 | Not Available | Negative | 749857 - 752211 | 87443.4 |
| atp-dependent protease atp-binding subunit clpx | FCU55_03725 | Not Available | Negative | 752399 - 753673 | 46319.6 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | FCU55_03730 | Not Available | Negative | 753799 - 754422 | 23188.1 |
| trigger factor | FCU55_03735 | Not Available | Negative | 754668 - 755966 | 48253.4 |
| transcriptional regulator bola | FCU55_03740 | Not Available | Negative | 756310 - 756627 | 11994.3 |
| hypothetical protein | FCU55_03745 | Not Available | Positive | 756932 - 757510 | 20951.3 |
| muropeptide mfs transporter ampg | FCU55_03750 | Not Available | Positive | 757554 - 759029 | 53320.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





