Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux rnd transporter periplasmic adaptor subunit acra | FCU55_03600 | Not Available | Positive | 725454 - 726647 | 42169.1 |
| multidrug efflux rnd transporter permease subunit | FCU55_03605 | Not Available | Positive | 726670 - 729819 | 113584.0 |
| hha toxicity modulator tomb | FCU55_03610 | Not Available | Positive | 730365 - 730739 | 14558.1 |
| hemolysin expression modulator hha | FCU55_03615 | Not Available | Positive | 730765 - 730983 | 8628.46 |
| maltose o-acetyltransferase | FCU55_03620 | Not Available | Positive | 731157 - 731708 | 20076.2 |
| hypothetical protein | FCU55_03625 | Not Available | Positive | 731824 - 732294 | 18268.2 |
| cyclic-guanylate-specific phosphodiesterase pdeb | FCU55_03630 | Not Available | Positive | 732458 - 734008 | 58794.9 |
| duf1428 family protein | FCU55_03635 | Not Available | Negative | 734050 - 734403 | 13332.9 |
| dna base-flipping protein | FCU55_03645 | Not Available | Positive | 734704 - 735093 | 14407.4 |
| hypothetical protein | FCU55_03650 | Not Available | Negative | 735124 - 735696 | 19442.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





