Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cys-trna(pro)/cys-trna(cys) deacylase ybak | FCU55_03500 | Not Available | Positive | 702939 - 703418 | 17123.9 |
| hypothetical protein | FCU55_03505 | Not Available | Positive | 703442 - 704242 | 30846.1 |
| hypothetical protein | FCU55_03510 | Not Available | Positive | 704239 - 704742 | 19684.3 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | FCU55_03515 | Not Available | Negative | 704780 - 706432 | 60827.4 |
| mfs transporter | FCU55_03520 | Not Available | Positive | 706650 - 707870 | 43312.2 |
| kef family k(+) transporter | FCU55_03525 | Not Available | Positive | 708109 - 709785 | 59508.5 |
| inosine/guanosine kinase | FCU55_03530 | Not Available | Negative | 709915 - 711219 | 48451.4 |
| acetyl esterase | FCU55_03535 | Not Available | Positive | 711371 - 712330 | 36099.0 |
| ferrochelatase | FCU55_03540 | Not Available | Negative | 712327 - 713289 | 35944.4 |
| adenylate kinase | FCU55_03545 | Not Available | Negative | 713421 - 714065 | 23587.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





