Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2931 family protein | FCU55_03395 | Not Available | Negative | 681996 - 682664 | 25449.7 |
| duf2931 family protein | FCU55_03400 | Not Available | Negative | 682671 - 683339 | 25492.9 |
| duf2931 family protein | FCU55_03405 | Not Available | Negative | 683346 - 684005 | 25077.1 |
| type vi secretion system tube protein hcp | FCU55_03410 | Not Available | Negative | 683995 - 685998 | 75209.7 |
| abc transporter permease | FCU55_03415 | Not Available | Negative | 686167 - 688581 | 89184.4 |
| abc transporter atp-binding protein | FCU55_03420 | Not Available | Negative | 688578 - 689264 | 24534.5 |
| multifunctional acyl-coa thioesterase i/protease i/lysophospholipase l1 | FCU55_03425 | Not Available | Positive | 689232 - 689858 | 23623.5 |
| nadp(+)-dependent aldehyde reductase | FCU55_03430 | Not Available | Positive | 689848 - 690657 | 29423.1 |
| chaperedoxin | FCU55_03435 | Not Available | Positive | 690718 - 691572 | 31762.9 |
| iron export abc transporter permease subunit fetb | FCU55_03440 | Not Available | Negative | 691755 - 692534 | 28166.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





