Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil/xanthine transporter | FCU55_03345 | Not Available | Negative | 670198 - 671499 | 47154.2 |
| allantoinase allb | FCU55_03350 | Not Available | Negative | 671555 - 672916 | 49590.4 |
| putative allantoin permease | FCU55_03355 | Not Available | Negative | 672976 - 674430 | 52447.2 |
| 2-hydroxy-3-oxopropionate reductase | FCU55_03360 | Not Available | Negative | 674600 - 675478 | 30774.4 |
| hydroxypyruvate isomerase | FCU55_03365 | Not Available | Negative | 675578 - 676354 | 29417.1 |
| glyoxylate carboligase | FCU55_03370 | Not Available | Negative | 676367 - 678148 | 64820.6 |
| hth-type transcriptional repressor allr | FCU55_03375 | Not Available | Negative | 678238 - 679053 | 29314.5 |
| ureidoglycolate lyase | FCU55_03380 | Not Available | Negative | 679131 - 679613 | 18222.7 |
| hth-type transcriptional activator alls | FCU55_03385 | Not Available | Positive | 679843 - 680769 | 34557.7 |
| trna 2-selenouridine(34) synthase mnmh | FCU55_03390 | Not Available | Positive | 680838 - 681944 | 41630.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





