Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter atp-binding protein metn | FCU55_03290 | Not Available | Negative | 658508 - 659539 | 37804.7 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | FCU55_03295 | Not Available | Positive | 659727 - 660299 | 21146.2 |
| carbamate kinase | FCU55_03305 | Not Available | Negative | 660831 - 661724 | 31673.1 |
| duf2877 domain-containing protein | FCU55_03310 | Not Available | Negative | 661721 - 662536 | 29667.9 |
| duf1116 domain-containing protein | FCU55_03315 | Not Available | Negative | 662547 - 663806 | 44980.7 |
| acyl-coa synthetase fdra | FCU55_03320 | Not Available | Negative | 663816 - 665483 | 58571.4 |
| ureidoglycolate dehydrogenase | FCU55_03325 | Not Available | Positive | 665800 - 666849 | 37933.3 |
| allantoate deiminase | FCU55_03330 | Not Available | Positive | 666871 - 668106 | 45629.5 |
| (s)-ureidoglycine aminohydrolase | FCU55_03335 | Not Available | Positive | 668117 - 668902 | 28752.2 |
| glycerate 3-kinase | FCU55_03340 | Not Available | Negative | 669031 - 670176 | 38796.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





