Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbrial protein | FCU55_03040 | Not Available | Positive | 604329 - 605339 | 36141.9 |
| ferrichrome porin fhua | FCU55_03045 | Not Available | Positive | 605559 - 607808 | 82471.8 |
| fe3+-hydroxamate abc transporter atp-binding protein fhuc | FCU55_03050 | Not Available | Positive | 607860 - 608657 | 28900.3 |
| fe(3+)-hydroxamate abc transporter substrate-binding protein fhud | FCU55_03055 | Not Available | Positive | 608657 - 609547 | 33051.3 |
| fe(3+)-hydroxamate abc transporter permease fhub | FCU55_03060 | Not Available | Positive | 609544 - 611526 | 70446.6 |
| glutamate-1-semialdehyde-2,1-aminomutase | FCU55_03065 | Not Available | Negative | 611561 - 612841 | 45431.7 |
| h(+)/cl(-) exchange transporter clca | FCU55_03070 | Not Available | Positive | 613066 - 614487 | 50337.9 |
| hypothetical protein | FCU55_03075 | Not Available | Positive | 614511 - 614576 | 2329.94 |
| iron-sulfur cluster insertion protein erpa | FCU55_03080 | Not Available | Positive | 614569 - 614913 | 12101.2 |
| tric cation channel family protein | FCU55_03085 | Not Available | Negative | 614960 - 615583 | 22129.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





