Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC025 26_NODE_81 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1263169 bp
Thymine Count
1268945 bp
Guanine Count
1281459 bp
Cytosine Count
1290488 bp
Genome Length
5104061 bp
Protein-coding Genes
4496 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nika protein | FCU53_24875 | Not Available | Negative | 5068143 - 5068466 | 12119.8 |
| rop family plasmid primer rna-binding protein | FCU53_24880 | Not Available | Positive | 5068738 - 5068932 | 7167.54 |
| sugar kinase | FCU53_24885 | Not Available | Positive | 5069682 - 5070776 | 39938.0 |
| nupc/nupg family nucleoside cnt transporter | FCU53_24890 | Not Available | Negative | 5070795 - 5072045 | 43704.8 |
| pseudouridine-5'-phosphate glycosidase | FCU53_24895 | Not Available | Negative | 5072129 - 5072386 | 9000.8 |
| rep protein | FCU53_24900 | Not Available | Negative | 5072387 - 5072637 | 9239.17 |
| hypothetical protein | FCU53_24905 | Not Available | Positive | 5073124 - 5073537 | 15704.0 |
| mobilization protein | FCU53_24910 | Not Available | Negative | 5073661 - 5074086 | 16731.6 |
| rep protein | FCU53_24915 | Not Available | Negative | 5074550 - 5074651 | 3769.63 |
| replication protein | FCU53_24920 | Not Available | Positive | 5074764 - 5075729 | 37212.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





