Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC025 26_NODE_81 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1263169 bp
Thymine Count
1268945 bp
Guanine Count
1281459 bp
Cytosine Count
1290488 bp
Genome Length
5104061 bp
Protein-coding Genes
4496 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulokinase | FCU53_02530 | Not Available | Negative | 512103 - 513803 | 61273.8 |
| arabinose operon transcriptional regulator arac | FCU53_02535 | Not Available | Positive | 514142 - 515020 | 33385.8 |
| deda family protein | FCU53_02540 | Not Available | Positive | 515106 - 515870 | 28213.8 |
| thiamine abc transporter atp-binding protein thiq | FCU53_02545 | Not Available | Negative | 515952 - 516650 | 24922.5 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | FCU53_02550 | Not Available | Negative | 516634 - 518244 | 59410.6 |
| thiamine abc transporter substrate binding subunit | FCU53_02555 | Not Available | Negative | 518220 - 519203 | 36205.2 |
| type iii effector | FCU53_02560 | Not Available | Positive | 519574 - 520143 | 21768.7 |
| hth-type transcriptional regulator sgrr | FCU53_02565 | Not Available | Negative | 520373 - 522031 | 64155.9 |
| 3-isopropylmalate dehydratase small subunit | FCU53_02575 | Not Available | Negative | 522358 - 522963 | 22558.7 |
| 3-isopropylmalate dehydratase large subunit | FCU53_02580 | Not Available | Negative | 522974 - 524374 | 49884.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





