Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC025 26_NODE_81 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1263169 bp
Thymine Count
1268945 bp
Guanine Count
1281459 bp
Cytosine Count
1290488 bp
Genome Length
5104061 bp
Protein-coding Genes
4496 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-sedoheptulose 7-phosphate isomerase | FCU53_22735 | Not Available | Positive | 4710203 - 4710781 | 20802.0 |
| class ii glutamine amidotransferase | FCU53_22740 | Not Available | Positive | 4710897 - 4711664 | 28637.2 |
| murein l,d-transpeptidase | FCU53_22745 | Not Available | Negative | 4711635 - 4712375 | 28022.8 |
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | FCU53_22750 | Not Available | Negative | 4712531 - 4712719 | 7174.63 |
| type ii toxin-antitoxin system antitoxin dinj | FCU53_22755 | Not Available | Negative | 4712811 - 4713071 | 9348.3 |
| nlpc/p60 family protein | FCU53_22760 | Not Available | Positive | 4713257 - 4714030 | 29786.6 |
| flagellar type iii secretion system protein flha | FCU53_22765 | Not Available | Negative | 4714128 - 4715867 | 63204.1 |
| putative lateral flagellar export/assembly protein lafu | FCU53_22770 | Not Available | Positive | 4715827 - 4716597 | 28345.1 |
| dna polymerase iv | FCU53_22775 | Not Available | Positive | 4716668 - 4717723 | 39445.1 |
| type i toxin-antitoxin system antitoxin yafn | FCU53_22780 | Not Available | Positive | 4717775 - 4718068 | 11236.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





