Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC025 26_NODE_81 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1263169 bp
Thymine Count
1268945 bp
Guanine Count
1281459 bp
Cytosine Count
1290488 bp
Genome Length
5104061 bp
Protein-coding Genes
4496 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU53_22255 | Not Available | Negative | 4608371 - 4608679 | 11578.2 |
| acyltransferase | FCU53_22260 | Not Available | Positive | 4608854 - 4609849 | 37464.0 |
| yiab family inner membrane protein | FCU53_22265 | Not Available | Negative | 4609891 - 4610328 | 16123.6 |
| hypothetical protein | FCU53_22270 | Not Available | Negative | 4610374 - 4610715 | 12557.0 |
| xylulokinase | FCU53_22275 | Not Available | Negative | 4610884 - 4612338 | 52659.4 |
| xylose isomerase | FCU53_22280 | Not Available | Negative | 4612410 - 4613732 | 49721.7 |
| d-xylose abc transporter substrate-binding protein | FCU53_22285 | Not Available | Positive | 4614098 - 4615090 | 35722.0 |
| d-xylose abc transporter atp-binding protein | FCU53_22290 | Not Available | Positive | 4615168 - 4616709 | 56419.8 |
| xylose abc transporter permease xylh | FCU53_22295 | Not Available | Positive | 4616687 - 4617868 | 41032.5 |
| xylr family transcriptional regulator | FCU53_22300 | Not Available | Positive | 4617946 - 4619124 | 44871.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





