Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC025 26_NODE_81 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1263169 bp
Thymine Count
1268945 bp
Guanine Count
1281459 bp
Cytosine Count
1290488 bp
Genome Length
5104061 bp
Protein-coding Genes
4496 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent succinate-semialdehyde dehydrogenase | FCU53_21440 | Not Available | Positive | 4444168 - 4445616 | 51782.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | FCU53_21445 | Not Available | Positive | 4445630 - 4446910 | 45634.4 |
| gaba permease | FCU53_21450 | Not Available | Positive | 4447147 - 4448547 | 51129.2 |
| dna-binding transcriptional regulator csir | FCU53_21455 | Not Available | Positive | 4448568 - 4449230 | 25018.4 |
| potassium binding protein kbp | FCU53_21460 | Not Available | Negative | 4449231 - 4449680 | 16064.0 |
| yqae/pmp3 family membrane protein | FCU53_21465 | Not Available | Negative | 4449764 - 4449922 | 5865.57 |
| helix-turn-helix transcriptional regulator | FCU53_21470 | Not Available | Positive | 4450105 - 4450404 | 10596.9 |
| thiosulfate sulfurtransferase ygap | FCU53_21475 | Not Available | Positive | 4450414 - 4450938 | 18649.9 |
| dna-binding protein stpa | FCU53_21480 | Not Available | Negative | 4450985 - 4451389 | 15348.4 |
| l-alanine exporter alae | FCU53_21485 | Not Available | Positive | 4452057 - 4452506 | 16968.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





