Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC025 26_NODE_81 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1263169 bp
Thymine Count
1268945 bp
Guanine Count
1281459 bp
Cytosine Count
1290488 bp
Genome Length
5104061 bp
Protein-coding Genes
4496 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux mfs transporter ydee | FCU53_20000 | Not Available | Positive | 4154905 - 4156092 | 42649.5 |
| protein mgts | FCU53_20005 | Not Available | Positive | 4156219 - 4156314 | 3509.36 |
| diguanylate cyclase dgcz | FCU53_20010 | Not Available | Negative | 4156533 - 4157423 | 33946.5 |
| ydei family stress tolerance ob fold protein | FCU53_20015 | Not Available | Negative | 4157678 - 4158070 | 14081.9 |
| peptidyl-dipeptidase dcp | FCU53_20020 | Not Available | Negative | 4158436 - 4160481 | 77518.9 |
| gtpase | FCU53_20355 | Not Available | Positive | 4206414 - 4207169 | 28343.1 |
| wyl domain-containing protein | FCU53_20360 | Not Available | Positive | 4207372 - 4208052 | 26159.9 |
| hypothetical protein | FCU53_20365 | Not Available | Positive | 4208203 - 4208880 | 24450.1 |
| duf905 domain-containing protein | FCU53_20370 | Not Available | Positive | 4208886 - 4209119 | 8775.41 |
| duf945 domain-containing protein | FCU53_20375 | Not Available | Positive | 4209209 - 4210027 | 31347.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





