Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC025 26_NODE_81 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1263169 bp
Thymine Count
1268945 bp
Guanine Count
1281459 bp
Cytosine Count
1290488 bp
Genome Length
5104061 bp
Protein-coding Genes
4496 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aquaporin z | FCU53_19535 | Not Available | Negative | 4037880 - 4038575 | 23703.2 |
| atp-dependent endonuclease | FCU53_19540 | Not Available | Positive | 4039001 - 4040659 | 63560.9 |
| duf535 domain-containing protein | FCU53_19545 | Not Available | Negative | 4040656 - 4041612 | 36951.0 |
| maca family efflux pump subunit | FCU53_19550 | Not Available | Positive | 4041763 - 4042878 | 40656.4 |
| macb family efflux pump subunit | FCU53_19555 | Not Available | Positive | 4042875 - 4044821 | 70551.5 |
| cold shock-like protein cspd | FCU53_19560 | Not Available | Negative | 4044894 - 4045118 | 7969.41 |
| atp-dependent clp protease adapter clps | FCU53_19565 | Not Available | Positive | 4045441 - 4045761 | 12179.7 |
| atp-dependent clp protease atp-binding subunit clpa | FCU53_19570 | Not Available | Positive | 4045792 - 4048068 | 84211.9 |
| Trna-ser | Not Available | Not Available | Positive | 4048475 - 4048562 | Not Available |
| translation initiation factor if-1 | FCU53_19580 | Not Available | Negative | 4048816 - 4049034 | 8250.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





