Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC025 26_NODE_81 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1263169 bp
Thymine Count
1268945 bp
Guanine Count
1281459 bp
Cytosine Count
1290488 bp
Genome Length
5104061 bp
Protein-coding Genes
4496 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydcf family protein | FCU53_11170 | Not Available | Positive | 2322233 - 2323033 | 29679.3 |
| aldehyde dehydrogenase | FCU53_11175 | Not Available | Positive | 2323230 - 2324669 | 52299.9 |
| cytochrome b561 | FCU53_11185 | Not Available | Positive | 2325899 - 2326429 | 20261.7 |
| hypothetical protein | FCU53_11190 | Not Available | Positive | 2326674 - 2326847 | 5764.08 |
| type i toxin-antitoxin system toxin hokb | FCU53_11195 | Not Available | Negative | 2326919 - 2327068 | 5645.21 |
| methyl-accepting chemotaxis protein trg | FCU53_11200 | Not Available | Positive | 2327443 - 2329083 | 58807.2 |
| lysr family transcriptional regulator | FCU53_11205 | Not Available | Negative | 2329122 - 2330045 | 33375.5 |
| voc family protein | FCU53_11210 | Not Available | Positive | 2330262 - 2331605 | 51081.6 |
| glucan biosynthesis protein | FCU53_11215 | Not Available | Positive | 2331830 - 2333485 | 62737.2 |
| duf465 domain-containing protein | FCU53_11220 | Not Available | Positive | 2333625 - 2333849 | 8878.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





