Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC025 26_NODE_81 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1263169 bp
Thymine Count
1268945 bp
Guanine Count
1281459 bp
Cytosine Count
1290488 bp
Genome Length
5104061 bp
Protein-coding Genes
4496 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| soxr-reducing system protein rsec | FCU53_10240 | Not Available | Negative | 2137420 - 2137899 | 16611.3 |
| sigma-e factor regulatory protein rseb | FCU53_10245 | Not Available | Negative | 2137896 - 2138852 | 35751.8 |
| anti-sigma-e factor rsea | FCU53_10250 | Not Available | Negative | 2138852 - 2139502 | 24322.8 |
| rna polymerase sigma factor rpoe | FCU53_10255 | Not Available | Negative | 2139535 - 2140110 | 21697.0 |
| rpoe leader peptide rsed | FCU53_10260 | Not Available | Negative | 2140107 - 2140262 | 6229.83 |
| l-aspartate oxidase | FCU53_10265 | Not Available | Positive | 2140518 - 2142140 | 60225.8 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase trmn | FCU53_10270 | Not Available | Negative | 2142125 - 2142862 | 27255.4 |
| atp-dependent rna helicase srmb | FCU53_10275 | Not Available | Positive | 2142994 - 2144328 | 49901.0 |
| lysr family transcriptional regulator | FCU53_10280 | Not Available | Negative | 2144361 - 2145242 | 33285.3 |
| cysteine/o-acetylserine transporter | FCU53_10285 | Not Available | Positive | 2145345 - 2145932 | 21305.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





