Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC025 26_NODE_81 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1263169 bp
Thymine Count
1268945 bp
Guanine Count
1281459 bp
Cytosine Count
1290488 bp
Genome Length
5104061 bp
Protein-coding Genes
4496 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4 subunit d | FCU53_09785 | Not Available | Positive | 2023310 - 2024749 | 51823.7 |
| hydrogenase 4 membrane subunit | FCU53_09790 | Not Available | Positive | 2024761 - 2025411 | 23403.1 |
| hydrogenase 4 subunit f | FCU53_09795 | Not Available | Positive | 2025416 - 2026996 | 56657.4 |
| hydrogenase 4 catalytic subunit hyfg | FCU53_09800 | Not Available | Positive | 2026986 - 2028701 | 65087.1 |
| hydrogenase 4 subunit h | FCU53_09805 | Not Available | Positive | 2028711 - 2029256 | 20158.4 |
| hydrogenase 4 catalytic subunit hyfi | FCU53_09810 | Not Available | Positive | 2029253 - 2030011 | 28030.9 |
| formate hydrogenlyase maturation protein hych | FCU53_09815 | Not Available | Positive | 2030004 - 2030417 | 15690.9 |
| sigma-54-dependent fis family transcriptional regulator | FCU53_09820 | Not Available | Positive | 2030447 - 2032459 | 75257.6 |
| formate transporter | FCU53_09825 | Not Available | Positive | 2032481 - 2033329 | 30595.4 |
| ai-2e family transporter | FCU53_09830 | Not Available | Negative | 2033366 - 2034427 | 39210.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





