Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC025 26_NODE_81 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1263169 bp
Thymine Count
1268945 bp
Guanine Count
1281459 bp
Cytosine Count
1290488 bp
Genome Length
5104061 bp
Protein-coding Genes
4496 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | FCU53_08220 | Not Available | Negative | 1723252 - 1723695 | 16554.9 |
| homoserine o-succinyltransferase | FCU53_08225 | Not Available | Positive | 1723852 - 1724781 | 35786.3 |
| malate synthase a | FCU53_08230 | Not Available | Positive | 1725050 - 1726651 | 60293.0 |
| isocitrate lyase | FCU53_08235 | Not Available | Positive | 1726681 - 1727985 | 47524.1 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | FCU53_08240 | Not Available | Positive | 1728071 - 1729795 | 67169.7 |
| glyoxylate bypass operon transcriptional repressor iclr | FCU53_08245 | Not Available | Negative | 1729812 - 1730636 | 29741.1 |
| methionine synthase | FCU53_08250 | Not Available | Positive | 1730836 - 1734519 | 136112.0 |
| na/pi cotransporter family protein | FCU53_08255 | Not Available | Positive | 1734739 - 1736370 | 59480.7 |
| dipeptidase pepe | FCU53_08260 | Not Available | Negative | 1736460 - 1737149 | 24597.7 |
| shikimate 5-dehydrogenase | FCU53_08265 | Not Available | Negative | 1737272 - 1738084 | 29122.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





