Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | FCU47_03595 | Not Available | Negative | 709262 - 710458 | 43337.5 |
| ribosome recycling factor | FCU47_03600 | Not Available | Negative | 710550 - 711107 | 20639.7 |
| ump kinase | FCU47_03605 | Not Available | Negative | 711257 - 711982 | 25971.9 |
| elongation factor ts | FCU47_03610 | Not Available | Negative | 712129 - 712980 | 30424.7 |
| 30s ribosomal protein s2 | FCU47_03615 | Not Available | Negative | 713238 - 713963 | 26759.2 |
| type i methionyl aminopeptidase | FCU47_03620 | Not Available | Positive | 714331 - 715125 | 29332.5 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | FCU47_03625 | Not Available | Positive | 715187 - 717859 | 102402.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | FCU47_03630 | Not Available | Positive | 717890 - 718714 | 29893.8 |
| duf3461 family protein | FCU47_03635 | Not Available | Positive | 719029 - 719415 | 15097.0 |
| cdar family transcriptional regulator | FCU47_03640 | Not Available | Negative | 719504 - 720661 | 43660.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





