Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iv subunit b | FCU47_02805 | Not Available | Negative | 547203 - 549095 | 70231.9 |
| esterase yqia | FCU47_02810 | Not Available | Negative | 549124 - 549705 | 21642.7 |
| 3',5'-cyclic-amp phosphodiesterase | FCU47_02815 | Not Available | Negative | 549705 - 550532 | 30939.7 |
| duf1249 family protein | FCU47_02820 | Not Available | Negative | 550557 - 550979 | 16549.0 |
| adp-ribose pyrophosphatase | FCU47_02825 | Not Available | Negative | 550980 - 551609 | 23668.2 |
| outer membrane channel protein tolc | FCU47_02830 | Not Available | Positive | 551814 - 553295 | 53743.7 |
| duf1190 family protein | FCU47_02835 | Not Available | Positive | 553443 - 554114 | 23480.7 |
| glutathionylspermidine synthase family protein | FCU47_02840 | Not Available | Positive | 554120 - 555280 | 45028.4 |
| 4,5-dopa dioxygenase extradiol | FCU47_02845 | Not Available | Negative | 555318 - 556133 | 29855.9 |
| zinc transporter zupt | FCU47_02850 | Not Available | Positive | 556249 - 557022 | 26514.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





