Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin ibsc | FCU47_02185 | Not Available | Negative | 423334 - 423393 | 2179.02 |
| d-3-phosphoglycerate dehydrogenase | FCU47_02190 | Not Available | Negative | 423622 - 424854 | 44178.4 |
| ribose-5-phosphate isomerase rpia | FCU47_02195 | Not Available | Negative | 425110 - 425769 | 22861.8 |
| hypothetical protein | FCU47_02200 | Not Available | Negative | 425825 - 426055 | 8388.54 |
| lysr family transcriptional regulator argp | FCU47_02205 | Not Available | Positive | 426197 - 427090 | 33473.6 |
| methylmalonyl-coa mutase | FCU47_02210 | Not Available | Positive | 427294 - 429438 | 77926.6 |
| methylmalonyl co-a mutase-associated gtpase meab | FCU47_02215 | Not Available | Positive | 429431 - 430426 | 36735.2 |
| methylmalonyl-coa decarboxylase | FCU47_02220 | Not Available | Positive | 430437 - 431222 | 29174.3 |
| propionyl-coa:succinate coa transferase | FCU47_02225 | Not Available | Positive | 431246 - 432724 | 53887.6 |
| lysr family transcriptional regulator | FCU47_02230 | Not Available | Negative | 432721 - 433617 | 34575.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





