Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamate kinase | FCU47_01975 | Not Available | Positive | 377815 - 378747 | 33072.9 |
| ef2563 family selenium-dependent molybdenum hydroxylase system protein | FCU47_01980 | Not Available | Negative | 378788 - 380413 | 57697.5 |
| putative selenium-dependent hydroxylase accessory protein yqec | FCU47_01985 | Not Available | Negative | 380461 - 381231 | 28179.2 |
| molybdenum cofactor cytidylyltransferase | FCU47_01990 | Not Available | Positive | 381334 - 381912 | 21468.3 |
| putative selenate reductase subunit ygfk | FCU47_01995 | Not Available | Positive | 382234 - 385332 | 115614.0 |
| putative aminohydrolase ssna | FCU47_02000 | Not Available | Positive | 385335 - 386663 | 48887.3 |
| molybdopterin-dependent oxidoreductase fad-binding subunit | FCU47_02005 | Not Available | Positive | 386714 - 387493 | 28635.2 |
| molybdopterin-dependent oxidoreductase mo/fe-s-binding subunit | FCU47_02010 | Not Available | Positive | 387490 - 390360 | 103527.0 |
| xanthine/proton symporter xanq | FCU47_02015 | Not Available | Positive | 390525 - 391925 | 49111.5 |
| guanine deaminase | FCU47_02020 | Not Available | Positive | 391943 - 393259 | 50101.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





