Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | FCU47_01860 | Not Available | Negative | 356233 - 356493 | 10411.1 |
| flhb hrpn yscu spas family protein | FCU47_01865 | Not Available | Negative | 356509 - 356970 | 17665.3 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | FCU47_01870 | Not Available | Negative | 356979 - 357746 | 28287.8 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | FCU47_01875 | Not Available | Negative | 357748 - 358008 | 9429.87 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | FCU47_01880 | Not Available | Negative | 358018 - 358683 | 24634.6 |
| yscq/hrcq family type iii secretion apparatus protein | FCU47_01885 | Not Available | Negative | 358673 - 359620 | 36140.3 |
| type iii secretion protein | FCU47_01895 | Not Available | Negative | 360511 - 360927 | 16381.2 |
| type iii secretion protein | FCU47_01910 | Not Available | Negative | 362771 - 362902 | 5001.28 |
| ghot/ortt family toxin | FCU47_01915 | Not Available | Negative | 363248 - 363427 | 6706.58 |
| hypothetical protein | FCU47_01920 | Not Available | Negative | 363494 - 365104 | 60402.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





