Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU47_01740 | Not Available | Negative | 341236 - 341301 | 2699.43 |
| yebb family permuted papain-like enzyme | FCU47_01745 | Not Available | Positive | 341372 - 341974 | 22676.2 |
| crossover junction endodeoxyribonuclease ruvc | FCU47_01750 | Not Available | Negative | 341976 - 342497 | 18747.9 |
| yebc/pmpr family dna-binding transcriptional regulator | FCU47_01755 | Not Available | Negative | 342532 - 343272 | 26424.0 |
| dihydroneopterin triphosphate diphosphatase | FCU47_01760 | Not Available | Negative | 343301 - 343753 | 17307.6 |
| aspartate--trna ligase | FCU47_01765 | Not Available | Negative | 343871 - 345643 | 65873.2 |
| hydrolase | FCU47_01770 | Not Available | Positive | 345953 - 346519 | 20489.5 |
| duf72 domain-containing protein | FCU47_01775 | Not Available | Positive | 346516 - 347010 | 19263.2 |
| recombinase family protein | FCU47_01780 | Not Available | Positive | 347063 - 348169 | 41766.2 |
| is3-like element is2 family transposase | FCU47_01785 | Not Available | Positive | 348219 - 348986 | 29056.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





