Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| umud domain protein | FCU47_24280 | Not Available | Negative | 4935397 - 4935528 | 5099.07 |
| mrna interferase pemk | FCU47_24305 | Not Available | Negative | 4938636 - 4938968 | 11881.5 |
| antitoxin pemi | FCU47_24310 | Not Available | Negative | 4938970 - 4939227 | 9333.16 |
| cpbp family intramembrane metalloprotease | FCU47_24315 | Not Available | Negative | 4939320 - 4939973 | 24308.9 |
| incfii family plasmid replication initiator repa | FCU47_24325 | Not Available | Negative | 4940913 - 4941770 | 32755.7 |
| repa leader peptide tap | FCU47_24330 | Not Available | Negative | 4941763 - 4941837 | 2665.28 |
| hypothetical protein | FCU47_24335 | Not Available | Positive | 4941872 - 4942082 | 8002.48 |
| is66 family insertion sequence element accessory protein tnpb | FCU47_24345 | Not Available | Positive | 4942491 - 4942841 | 13219.1 |
| is66-like element isec23 family transposase | FCU47_24350 | Not Available | Positive | 4942872 - 4944485 | 61275.1 |
| hypothetical protein | FCU47_24360 | Not Available | Negative | 4944965 - 4945390 | 15646.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





