Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent succinate-semialdehyde dehydrogenase | FCU47_22610 | Not Available | Positive | 4599273 - 4600721 | 51808.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | FCU47_22615 | Not Available | Positive | 4600735 - 4602015 | 45733.3 |
| gaba permease | FCU47_22620 | Not Available | Positive | 4602253 - 4603653 | 51083.1 |
| dna-binding transcriptional regulator csir | FCU47_22625 | Not Available | Positive | 4603674 - 4604336 | 24992.3 |
| potassium binding protein kbp | FCU47_22630 | Not Available | Negative | 4604337 - 4604786 | 16064.0 |
| yqae/pmp3 family membrane protein | FCU47_22635 | Not Available | Negative | 4604870 - 4605028 | 5865.57 |
| helix-turn-helix transcriptional regulator | FCU47_22640 | Not Available | Positive | 4605211 - 4605510 | 10596.9 |
| thiosulfate sulfurtransferase ygap | FCU47_22645 | Not Available | Positive | 4605520 - 4606044 | 18701.9 |
| dna-binding protein stpa | FCU47_22650 | Not Available | Negative | 4606091 - 4606495 | 15348.4 |
| l-alanine exporter alae | FCU47_22655 | Not Available | Positive | 4607163 - 4607612 | 16950.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





